0 Table of Contents |
1 Home |
2 Authors |
3 Background |
4 Childhood Cancer |
5 Contact |
6 Downloads |
7 Ehr |
8 Example Raw Data |
9 Example Study Metadata |
10 Example Research Study Baylor Cmg |
11 Family |
12 FHIR Basics |
13 Fhir Version |
14 Files |
15 Finding a Research Study |
16 Harmonization |
17 Ig Versioning |
18 Modular Ig |
19 Ncpi |
20 Participant |
21 Performing a Genomic Analysis |
22 Rare Disease |
23 Research Study |
24 Structure Definition Study Data Dictionary Variable Note |
25 Study Metadata |
26 Tabular |
27 Use Case Tabular Data |
28 Use Cases |
29 Using Source Data |
30 Artifacts Summary |
30.1 CDM Research Study |
30.2 DRS Document Reference |
30.3 NCPI Disease |
30.4 NCPI Family Relationship |
30.5 NCPI Research Study |
30.6 NCPI Phenotype |
30.7 Raw Data Observation |
30.8 Research Consortium |
30.9 Research Document Reference |
30.10 Research Study Subject |
30.11 Research Task |
30.12 NCPI Data Dictionary Harmony |
30.13 NCPI Study Data Dictionary Data Table |
30.14 NCPI Study Data Dictionary Data Variable |
30.15 NCPI Study Group |
30.16 Study Summary |
30.17 Study Variable Summary |
30.18 Research Study Consent |
30.19 DRS Attachment |
30.20 Research Consent Disease Abbreviation |
30.21 Research Usage Limitation Disease Code |
30.22 Research Study Design |
30.23 Research Study Subject Consent |
30.24 Supporting Information |
30.25 Condition Inheritance Pattern |
30.26 Disease Codes |
30.27 Case/Control Vars for 'status' categoricals |
30.28 Harmonized ValueSet for data table |
30.29 Table ValueSet |
30.30 LOINC Answers |
30.31 MeSH Terms |
30.32 NCPI FHIR Codes |
30.33 NIH Consent Code ValueSet |
30.34 Phenotype Codes |
30.35 Study Design |
30.36 tbd-codes |
30.37 Condition Inheritance Pattern |
30.38 dbGaP Study Design |
30.39 Dataset CodeSystem (lists all tables) |
30.40 Datatable CodeSystem (lists all variables) |
30.41 Human Phenotype Ontology |
30.42 Human Genome Variation Society nomenclature |
30.43 LOINC Answers |
30.44 Mondo Disease Ontology |
30.45 NCI Thesaurus |
30.46 NCPI FHIR Codes |
30.47 Data Types for NCPI Research |
30.48 NCPI Study Type |
30.49 NIH Consent Codes |
30.50 Online Mendelian Inheritance in Man |
30.51 ToBeDeterminedCodes ('TbdCodes') |
30.52 Summary detail for Center for Mendelian Genomics |
30.53 Baylor Hopkins Center for Mendelian Genomics (BH CMG) |
30.54 The Center for Mendelian Genomics Consortium (CMG) Consortium |
30.55 Baylor Hopkins Center for Mendelian Genomics (BH CMG) |
30.56 Participants consented under HMB-IRB-NPU |
30.57 Participants consented under HMB-NPU |
30.58 BH CMG Study Participants |
30.59 Participants consented under HMB-IRB-NPU |
30.60 Participants consented under HMB-NPU |
30.61 diagnostic-implication-1 |
30.62 diagnostic-report-1 |
30.63 disease-example-1 |
30.64 drs-document-reference-example-1 |
30.65 ds-bav-consent |
30.66 Example Encounter Study 01 Patient 01 |
30.67 Example of Raw Data |
30.68 Example of a Questionnaire to Represent Raw Data |
30.69 Example of a QuestionnaireResponse to Represent Raw Data |
30.70 Concept Map showing representing harmonization mappings |
30.71 Data-Dictionary Table |
30.72 Example Study Data Dictionary Variable subjectid |
30.73 Example Study Data Dictionary Variable gender |
30.74 Example Study Data Dictionary Variable age_at_enrollment |
30.75 Example Study Data Dictionary Variable bmi |
30.76 Data Dictionary Variable status |
30.77 Example Variable Summary with categories (gender) |
30.78 Example Group used for Summary Results |
30.79 family-relationship-example-1 |
30.80 family-relationship-example-2 |
30.81 family-relationship-example-3 |
30.82 family-relationship-example-4 |
30.83 gru-consent |
30.84 HMB-IRB-NPU Consent |
30.85 HMB-NPU Consent |
30.86 ncpi-research-consortium-01 |
30.87 ncpi-research-study-01 |
30.88 ncpi-research-study-01-conset-group-01-main |
30.89 ncpi-research-study-01-group-01-main |
30.90 ncpi-research-study-01-patient-01 |
30.91 ncpi-research-study-01-patient-02 |
30.92 NCPI Research Study 01 Specimen 01 |
30.93 ncpi-research-study-subject-01 |
30.94 organization-example-1 |
30.95 patient-example-1 |
30.96 patient-example-2 |
30.97 patient-example-3 |
30.98 phenotype-example-1 |
30.99 practitioner-example-1 |
30.100 practitioner-role-example-1 |
30.101 research-document-reference-example-1 |
30.102 research-study-cmg |
30.103 research-study-example-1 |
30.104 research-study-phs000711 |
30.105 research-subject-example-1 |
30.106 research-subject-example-2 |
30.107 research-subject-example-3 |
30.108 research-subject-study-01-patient-01 |
30.109 research-subject-study-01-patient-02 |
30.110 specimen-example-1 |
30.111 task-example-1 |
30.112 task-example-2 |
30.113 variant-example-1 |