Validation Results for NCPIFHIRImplementationGuide

Generated Mon Mar 04 22:40:02 UTC 2024, FHIR version 4.3.0 for NCPI-FHIR-Implementation-Guide#0.2.0 (canonical = https://nih-ncpi.github.io/ncpi-fhir-ig (history)). See Errors Only

Quality Checks
Publisher Version:IG Publisher Version: v1.6.0
Publication Code:n/a . PackageId = NCPI-FHIR-Implementation-Guide, Canonical = https://nih-ncpi.github.io/ncpi-fhir-ig
Realm Check for n/a:
  • n/a
Publication Request:
  • Error fetching package-list from https://nih-ncpi.github.io/ncpi-fhir-ig: Not Found
  • This IG has never been published, so the version should start with '0.' or include a patch version e.g. '-ballot'
  • No publication request found
Supressed Messages:No Suppressed Issues
Dependency Checks:
PackageVersionFHIRCanonicalWeb BaseComment
.. NCPI-FHIR-Implementation-Guide0.2.0R4Bhttps://nih-ncpi.github.io/ncpi-fhir-ig
... hl7.terminology.r45.3.0 OR4http://terminology.hl7.orghttp://terminology.hl7.org/5.3.0FHIR Version Mismatch. Latest Release is 5.4.0
... hl7.fhir.uv.extensions.r41.0.0 MR4http://hl7.org/fhir/extensionshttp://hl7.org/fhir/extensions/1.0.0FHIR Version Mismatch
... hl7.fhir.us.core3.1.1 OR4http://hl7.org/fhir/us/corehttp://hl7.org/fhir/us/core/STU3.1.1FHIR Version Mismatch. Latest Release is 6.1.0
Templates: fhir.base.template#current. Tools: 0.1.0
Dependent IGs:no references
Global Profiles:(none declared)
Terminology Server(s):http://tx.fhir.org/r4 (details)
HTA Analysis:Non-HL7 Igs are exempt from terminology dependency analysis
R5 Dependencies:(none)
Draft Dependencies:
Modifier Extensions:(none)
Previous Version Comparison: Unable to compare with previous version: Unable to find version history at https://nih-ncpi.github.io/ncpi-fhir-ig (Problem #1 with package-list.json at https://nih-ncpi.github.io/ncpi-fhir-ig: Not Found)
IPA Comparison: n/a
IPS Comparison: n/a
Summary: errors = 31, warn = 138, info = 63, broken links = 17
FilenameErrorsWarningsHints
Build Errors1740
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ConditionInheritanceMode021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-dbgap-study-design210
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1121
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo222
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-loinc-answers000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo210
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit210
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-data-types011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-study-type311
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-nih-consent021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim210
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes410
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs211
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-10210
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-disease-example-1010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Condition-phenotype-example-1002
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-ds-bav-consent111
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-gru-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-hmb-irb-npu-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Consent-hmb-npu-consent110
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DiagnosticReport-diagnostic-report-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-drs-document-reference-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/DocumentReference-research-document-reference-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Encounter-example-encounter-study-01-patient-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-cmg-research-study-bhcmg-consent-group-hmb-irb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-cmg-research-study-bhcmg-consent-group-hmb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-cmg-research-study-bhcmg-group000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-example-summary-group-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-ncpi-research-study-01-conset-group-01-main000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Group-ncpi-research-study-01-group-01-main000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-cmg053
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-anvil-summary-phs0007110103
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-diagnostic-implication-1033
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-example-observation-data-row-1021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-example-study-summary-gender023
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-1020
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-2020
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-3020
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-family-relationship-example-4020
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Observation-variant-example-1034
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-4000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-5000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Organization-cmg-research-consortium000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Organization-ncpi-research-consortium-01100
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Organization-organization-example-1001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-ncpi-research-study-01-patient-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-ncpi-research-study-01-patient-02000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-patient-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-patient-example-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Patient-patient-example-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Practitioner-practitioner-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/PractitionerRole-practitioner-role-example-1011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Questionnaire-example-questionnaire-demographics-1100
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1012
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-cmg-research-study-bhcmg008
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-irb-npu200
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-npu000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-ncpi-research-study-01011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-ncpi-research-study-subject-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-cmg011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchStudy-research-study-phs000711011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-2000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-example-3000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-01000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-02000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-ncpi-research-study-01-specimen-01001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Specimen-specimen-example-1000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-common-data-model-research-study0260
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-disease000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-family-relationship000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-attachment000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-drs-document-reference000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-consortium000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-document-reference000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-research-study021
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-ncpi-specimen-task000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-phenotype000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-raw-data-observation010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-consent-disease-abbreviation120
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-disease-use-limitation010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-study-design010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-study-subject011
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-research-study-subject-consent010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-harmony000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-table000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-data-dictionary-variable000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-group002
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-summary013
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-study-variable-summary003
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/StructureDefinition-supporting-info010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Task-task-example-1001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/Task-task-example-2001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-condition-inheritance-vs010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-mappings-valueset-1030
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-datatable-valueset-1010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-disease-codes000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1030
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-loinc-answers000
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-mesh-terms010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-ncpi-vs010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-nih-consent-codes010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-phenotype-codes001
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-study-design010
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes220
/home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/input/resources/StructureDefinition-research-study-consent003

n/a Show Validation Information

output​/Organization-ncpi-research-consortium-01​.html​#​/html​/body​/div​/div​/div​/div​/div​/div​/p​/a at Line 302, column 601errorThe link 'www.consortium-home.org' for "www.consortium-home.org" cannot be resolved
output​/ResearchStudy-cmg-research-study-subject-cmg-hmb-irb-npu​.html​#​/html​/body​/div​/div​/div​/div​/div​/div​/p​/a at Line 302, column 986errorThe link 'cmg-research-study-bhcmg-group-hmb-irb-npu' for "cmg-research-study-bhcmg-group-hmb-irb-npu" cannot be resolved
output​/StructureDefinition-research-study-consent​.html​#​/html​/body​/div​/div​/div​/div​/div​/div​/ul​/li​/a at Line 380, column 123errorThe link 'codesystem-nih-consent.html' for "NIH Consent CodeSystem" cannot be resolved
output​/StructureDefinition-research-study-consent​.html​#​/html​/body​/div​/div​/div​/div​/div​/div​/p​/a at Line 387, column 145errorThe link 'consent-hmb-npu-consent.html' for "HMB-NPU Consent" cannot be resolved
output​/StructureDefinition-research-study-consent​.html​#​/html​/body​/div​/div​/div​/div​/div​/div​/p​/a at Line 387, column 379errorThe link 'codesystem-nih-consent.html' for "NIH Consent" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/p​/a at Line 336, column 45errorThe link 'researchstudy-cmg-research-study-bhcmg.html' for "BH-CMG" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/p​/a at Line 720, column 83errorThe link 'structuredefinition-research-study-subject-consent.html' for "research-study-subject-consent" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/a at Line 735, column 8errorThe link 'organization-cmg-research-consortium.html' for "CMG Consortium" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/a at Line 736, column 8errorThe link 'researchstudy-cmg-research-study-bhcmg.html' for "BH-CMG" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/a at Line 738, column 12errorThe link 'group-cmg-research-study-bhcmg-group.html' for "BH-CMG All Participants" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/a at Line 739, column 12errorThe link 'researchstudy-cmg-research-study-subject-cmg-hmb-npu.html' for "Consent Group HMB-NPU" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/ul​/li​/a at Line 741, column 16errorThe link 'consent-hmb-npu-consent.html' for "Consent HMB-NPU" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/ul​/li​/a at Line 742, column 16errorThe link 'group-cmg-research-study-bhcmg-consent-group-hmb-npu.html' for "Related StudyGroup" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/a at Line 745, column 12errorThe link 'researchstudy-cmg-research-study-subject-cmg-hmb-irb-npu.html' for "Consent Group HMB-IRB-NPU" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/ul​/li​/a at Line 747, column 16errorThe link 'consent-hmb-irb-npu-consent.html' for "Consent HMB-IRB-NPU" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/ul​/li​/a at Line 748, column 16errorThe link 'Group-cmg-research-study-bhcmg-group-hmb-irb-npu.html' for "Related StudyGroup" cannot be resolved
output​/example-research-study-baylor-cmg​.html​#​/html​/body​/div​/div​/div​/div​/div​/ul​/li​/ul​/li​/ul​/li​/a at Line 749, column 16errorThe link 'group-cmg-research-study-bhcmg-consent-group-hmb-irb-npu.html' for "Related StudyGroup" cannot be resolved
1warningThe HTML fragment 'ip-statements.xhtml' is not included anywhere in the produced implementation guide
2warningAn HTML fragment from the set [cross-version-analysis.xhtml, cross-version-analysis-inline.xhtml] is not included anywhere in the produced implementation guide
3warningAn HTML fragment from the set [dependency-table.xhtml, dependency-table-short.xhtml] is not included anywhere in the produced implementation guide
4warningThe HTML fragment 'globals-table.xhtml' is not included anywhere in the produced implementation guide

fsh-generated/resources/ActivityDefinition-example-study-data-dictionary-table-1.json Show Validation Information (1)

PathSeverityMessage
ActivityDefinition​.topic[0]​.coding[0] (l1​/c727)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated

fsh-generated/resources/CodeSystem-ConditionInheritanceMode.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c6946)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
CodeSystem (l1/c6946)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

fsh-generated/resources/CodeSystem-dbgap-study-design.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'https:​/​/dbgap-api​.ncbi​.nlm​.nih​.gov​/fhir​/x1​/CodeSystem​/ResearchStudy-StudyDesign')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-dbgap-study-design.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/dbgap-study-design) does not match the URL (https://dbgap-api.ncbi.nlm.nih.gov/fhir/x1/CodeSystem/ResearchStudy-StudyDesign)
CodeSystem.count (l1/c3106)warningThe code system is a fragment/example, but the number of concepts (15) exceeds or matches the stated total number (15)
fsh-generated​/resources​/CodeSystem-dbgap-study-designerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/dbgap-study-design vs https://dbgap-api.ncbi.nlm.nih.gov/fhir/x1/CodeSystem/ResearchStudy-StudyDesign

fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c1324)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
CodeSystem (l1/c1324)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem.count (l1/c2169)errorThe code system is complete, but the number of concepts (6) does not match the stated total number (5)
CodeSystem (l1/c2560)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
CodeSystem (l1/c2560)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

fsh-generated/resources/CodeSystem-hpo.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'http:​/​/purl​.obolibrary​.org​/obo​/hp​.owl')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo) does not match the URL (http://purl.obolibrary.org/obo/hp.owl)
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem.count (l1/c230643)warningThe code system is a fragment/example, but the number of concepts (1,882) exceeds or matches the stated total number (1,880)
CodeSysteminformationReview the All Codes Value Set - incomplete CodeSystems generally should not have an all codes value set specified
CodeSystem (l1/c337392)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-hpoerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo vs http://purl.obolibrary.org/obo/hp.owl

fsh-generated/resources/CodeSystem-loinc-answers.json Show Validation Information (1)


fsh-generated/resources/CodeSystem-mondo.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'http:​/​/purl​.obolibrary​.org​/obo​/mondo​.owl')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo) does not match the URL (http://purl.obolibrary.org/obo/mondo.owl)
CodeSystem.count (l1/c2019)warningThe code system is a fragment/example, but the number of concepts (7) exceeds or matches the stated total number (3)
fsh-generated​/resources​/CodeSystem-mondoerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo vs http://purl.obolibrary.org/obo/mondo.owl

fsh-generated/resources/CodeSystem-ncit.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'http:​/​/purl​.obolibrary​.org​/obo​/ncit​.owl')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit) does not match the URL (http://purl.obolibrary.org/obo/ncit.owl)
CodeSystem.count (l1/c1536)warningThe code system is a fragment/example, but the number of concepts (4) exceeds or matches the stated total number (3)
fsh-generated/resources/CodeSystem-nciterrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit vs http://purl.obolibrary.org/obo/ncit.owl

fsh-generated/resources/CodeSystem-ncpi.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c4552)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

fsh-generated/resources/CodeSystem-ncpi-data-types.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c1531)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

fsh-generated/resources/CodeSystem-ncpi-study-type.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'https:​/​/nih-ncpi​.github​.io​/ncpi-fhir-ig​/CodeSystem​/ncpi-study-types')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-study-type.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-type) does not match the URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types)
CodeSystem.urlerrorResource id/url mismatch: ncpi-study-type/https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c2955)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated​/resources​/CodeSystem-ncpi-study-typeerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-type vs https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types

fsh-generated/resources/CodeSystem-nih-consent.json Show Validation Information (1)

PathSeverityMessage
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c2449)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
CodeSystem (l1/c2449)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

fsh-generated/resources/CodeSystem-omim.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'https:​/​/omim​.org​/')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim) does not match the URL (https://omim.org/)
CodeSystem.count (l1/c73886)warningThe code system is a fragment/example, but the number of concepts (498) exceeds or matches the stated total number (497)
fsh-generated/resources/CodeSystem-omimerrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim vs https://omim.org/

fsh-generated/resources/CodeSystem-tbd-codes.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'http:​/​/hl7​.org​/fhir​/uv​/genomics-reporting​/CodeSystem​/tbd-codes')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes)
CodeSystem (l1/c8452)errorWhen HL7 is publishing a resource, the owning committee must be stated using the http://hl7.org/fhir/StructureDefinition/structuredefinition-wg extension
CodeSystemwarningHL7 Defined CodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c8452)errorPublished code systems SHALL conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated​/resources​/CodeSystem-tbd-codeserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes

fsh-generated/resources/CodeSystem-v3-hgvs.json Show Validation Information (1)

PathSeverityMessage
CodeSystem​.where(url = 'http:​/​/varnomen​.hgvs​.org')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs) does not match the URL (http://varnomen.hgvs.org)
CodeSysteminformationCodeSystems SHOULD have a stated value for the caseSensitive element so that users know the status and meaning of the code system clearly
CodeSystem (l1/c11770)warningPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated​/resources​/CodeSystem-v3-hgvserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs vs http://varnomen.hgvs.org

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.json Show Validation Information (1)

PathSeverityMessage
ConceptMap​.group[0]​.element[0]​.target[0] (l1​/c6365)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[0]​.element[1]​.target[0] (l1​/c6628)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[0]​.element[2]​.target[0] (l1​/c6949)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[0]​.element[3]​.target[0] (l1​/c7239)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[0]​.element[4]​.target[0] (l1​/c7536)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[1]​.element[0]​.target[0] (l1​/c7990)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[2]​.element[0]​.target[0] (l1​/c8488)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[3]​.element[0]​.target[0] (l1​/c9001)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap​.group[3]​.element[0]​.target[1] (l1​/c9263)warningThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
ConceptMap.group[1].target (l1/c7994)warningTarget Code System http://loinc.org doesn't have all content (content = not-present), so the target codes cannot be checked
ConceptMap.group[2].target (l1/c8492)warningTarget Code System http://purl.obolibrary.org/obo/hp.owl doesn't have all content (content = fragment), so the target codes cannot be checked
ConceptMap.group[3].target (l1/c9267)warningTarget Code System http://purl.obolibrary.org/obo/mondo.owl doesn't have all content (content = fragment), so the target codes cannot be checked
ConceptMap (l1/c9269)warningPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.title is mandatory, but it is not present
ConceptMap (l1/c9269)warningPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.name should be present, but it is not
ConceptMap (l1/c9269)warningPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.experimental is mandatory, but it is not present
ConceptMap (l1/c9269)warningPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.description is mandatory, but it is not present
ConceptMap​.group[0]​.element[0]​.target[0]​.code (l1​/c6299)warningThe code 'C2348584' comes from the system https://uts.nlm.nih.gov/uts/umls which could not be found, so it's not known whether it's valid in the value set 'https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1'
ConceptMap​.group[0]​.element[1]​.target[0]​.code (l1​/c6581)warningThe code 'C0079399' comes from the system https://uts.nlm.nih.gov/uts/umls which could not be found, so it's not known whether it's valid in the value set 'https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1'
ConceptMap​.group[0]​.element[2]​.target[0]​.code (l1​/c6883)warningThe code 'C168843' comes from the system https://uts.nlm.nih.gov/uts/umls which could not be found, so it's not known whether it's valid in the value set 'https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1'
ConceptMap​.group[0]​.element[3]​.target[0]​.code (l1​/c7188)warningThe code 'C1305855' comes from the system https://uts.nlm.nih.gov/uts/umls which could not be found, so it's not known whether it's valid in the value set 'https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1'
ConceptMap​.group[0]​.element[4]​.target[0]​.code (l1​/c7483)warningThe code 'C0872128' comes from the system https://uts.nlm.nih.gov/uts/umls which could not be found, so it's not known whether it's valid in the value set 'https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/datatable-mappings-valueset-1'

fsh-generated/resources/Condition-disease-example-1.json Show Validation Information (1)

PathSeverityMessage
Condition​.code​.coding[0]​.system (l40​/c4)warningA definition for CodeSystem 'http://purl.obolibrary.org/obo/ncit.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)

fsh-generated/resources/Condition-phenotype-example-1.json Show Validation Information (1)

PathSeverityMessage
Condition​.code​.coding[0]​.system (l18​/c4)informationA definition for CodeSystem 'http://purl.obolibrary.org/obo/hp.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Condition.code.coding[1] (l25/c8)Slicing InformationThis element does not match any known slice defined in the profile https://nih-ncpi.github.io/ncpi-fhir-ig/StructureDefinition/phenotype|0.2.0 (this may not be a problem, but you should check that it's not intended to match a slice) Show Reasoning

fsh-generated/resources/Consent-ds-bav-consent.json Show Validation Information (1)

PathSeverityMessage
Consent.scope.coding[0] (l43/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Consent​.provision​.extension[0]​.value​.ofType(CodeableConcept)​.coding[0]​.system (l24​/c10)informationA definition for CodeSystem 'urn:oid:2.16.840.1.113883.6.177' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Consent (l1/c2)errorConstraint failed: ppc-1: 'Either a Policy or PolicyRule' (defined in http://hl7.org/fhir/StructureDefinition/Consent)

fsh-generated/resources/Consent-gru-consent.json Show Validation Information (1)

PathSeverityMessage
Consent.scope.coding[0] (l21/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Consent (l1/c2)errorConstraint failed: ppc-1: 'Either a Policy or PolicyRule' (defined in http://hl7.org/fhir/StructureDefinition/Consent)

fsh-generated/resources/Consent-hmb-irb-npu-consent.json Show Validation Information (1)

PathSeverityMessage
Consent.scope.coding[0] (l21/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Consent (l1/c2)errorConstraint failed: ppc-1: 'Either a Policy or PolicyRule' (defined in http://hl7.org/fhir/StructureDefinition/Consent)

fsh-generated/resources/Consent-hmb-npu-consent.json Show Validation Information (1)

PathSeverityMessage
Consent.scope.coding[0] (l21/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Consent (l1/c2)errorConstraint failed: ppc-1: 'Either a Policy or PolicyRule' (defined in http://hl7.org/fhir/StructureDefinition/Consent)

fsh-generated/resources/DiagnosticReport-diagnostic-report-1.json Show Validation Information (1)


fsh-generated/resources/DocumentReference-drs-document-reference-example-1.json Show Validation Information (1)


fsh-generated/resources/DocumentReference-research-document-reference-example-1.json Show Validation Information (1)


fsh-generated/resources/Encounter-example-encounter-study-01-patient-01.json Show Validation Information (1)


fsh-generated/resources/Group-cmg-research-study-bhcmg-consent-group-hmb-irb-npu.json Show Validation Information (1)


fsh-generated/resources/Group-cmg-research-study-bhcmg-consent-group-hmb-npu.json Show Validation Information (1)


fsh-generated/resources/Group-cmg-research-study-bhcmg-group.json Show Validation Information (1)


fsh-generated/resources/Group-example-summary-group-1.json Show Validation Information (1)


fsh-generated/resources/Group-ncpi-research-study-01-conset-group-01-main.json Show Validation Information (1)


fsh-generated/resources/Group-ncpi-research-study-01-group-01-main.json Show Validation Information (1)


fsh-generated/resources/ImplementationGuide-NCPI-FHIR-Implementation-Guide.json Show Validation Information (1)


fsh-generated/resources/Observation-anvil-summary-cmg.json Show Validation Information (1)

PathSeverityMessage
Observation​.code​.coding[0]​.system (l5​/c4)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[0]​.code​.coding[0] (l21​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[1]​.code​.coding[0]​.system (l32​/c8)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[2]​.code​.coding[0]​.system (l44​/c8)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[3]​.code​.coding[0] (l56​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a subject
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-anvil-summary-phs000711.json Show Validation Information (1)

PathSeverityMessage
Observation​.code​.coding[0]​.system (l5​/c4)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[0]​.code​.coding[0]​.system (l21​/c8)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[1]​.code​.coding[0]​.system (l33​/c8)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[2]​.code​.coding[0] (l45​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[3]​.code​.coding[0] (l56​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[4]​.code​.coding[0] (l67​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[5]​.code​.coding[0] (l78​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[6]​.code​.coding[0] (l89​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[7]​.code​.coding[0] (l99​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation​.component[8]​.code​.coding[0] (l109​/c8)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a subject
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-diagnostic-implication-1.json Show Validation Information (1)

PathSeverityMessage
Observation.code (l15/c4)informationReference to experimental CodeSystem http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes|0.2.0
Observation.component[0].code (l31/c8)informationReference to experimental CodeSystem http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes|0.2.0
Observation​.component[0]​.value​.ofType(CodeableConcept)​.coding[0]​.system (l40​/c8)informationA definition for CodeSystem 'http://fhir.ncpi-project-forge.io/ValueSet/condition-inheritance-vs' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a subject
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-example-observation-data-row-1.json Show Validation Information (1)

PathSeverityMessage
Observation​.component[3]​.value​.ofType(CodeableConcept)​.coding[0] (l75​/c8)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-example-study-summary-gender.json Show Validation Information (1)

PathSeverityMessage
Observation.code.coding[0] (l10/c4)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
Observation​.value​.ofType(CodeableConcept)​.coding[0] (l19​/c4)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
Observation​.component[2]​.code​.coding[0] (l64​/c8)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-family-relationship-example-1.json Show Validation Information (1)

PathSeverityMessage
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-family-relationship-example-2.json Show Validation Information (1)

PathSeverityMessage
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-family-relationship-example-3.json Show Validation Information (1)

PathSeverityMessage
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-family-relationship-example-4.json Show Validation Information (1)

PathSeverityMessage
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/Observation-variant-example-1.json Show Validation Information (1)

PathSeverityMessage
Observation​.component[0]​.value​.ofType(CodeableConcept)​.coding[0]​.system (l57​/c8)informationA definition for CodeSystem 'https://www.ncbi.nlm.nih.gov/gene' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation​.component[1]​.value​.ofType(CodeableConcept)​.coding[0]​.system (l77​/c8)informationA definition for CodeSystem 'http://fhir.ncpi-project-forge.io/ValueSet/loinc-answers' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation.component[2].code (l89/c8)informationReference to experimental CodeSystem http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes|0.2.0
Observation​.component[7]​.value​.ofType(CodeableConcept)​.coding[0]​.system (l180​/c8)informationA definition for CodeSystem 'http://www.ncbi.nlm.nih.gov/refseq' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a subject
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have a performer
Observation (l1/c2)warningBest Practice Recommendation: In general, all observations should have an effective[x] ()

fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-1.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-2.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-3.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-4.json Show Validation Information (1)


fsh-generated/resources/ObservationDefinition-example-study-data-dictionary-variable-1-5.json Show Validation Information (1)


fsh-generated/resources/Organization-cmg-research-consortium.json Show Validation Information (1)


fsh-generated/resources/Organization-ncpi-research-consortium-01.json Show Validation Information (1)

PathSeverityMessage
Organization.text.diverrorNew Rule: Hyperlink 'www.consortium-home.org' at 'div/p/a' for 'www.consortium-home.org' does not resolve

fsh-generated/resources/Organization-organization-example-1.json Show Validation Information (1)

PathSeverityMessage
Organization.type[0] (l6/c6)informationReference to draft CodeSystem http://terminology.hl7.org/CodeSystem/organization-type|0.1.0

fsh-generated/resources/Patient-ncpi-research-study-01-patient-01.json Show Validation Information (1)


fsh-generated/resources/Patient-ncpi-research-study-01-patient-02.json Show Validation Information (1)


fsh-generated/resources/Patient-patient-example-1.json Show Validation Information (1)


fsh-generated/resources/Patient-patient-example-2.json Show Validation Information (1)


fsh-generated/resources/Patient-patient-example-3.json Show Validation Information (1)


fsh-generated/resources/Practitioner-practitioner-example-1.json Show Validation Information (1)


fsh-generated/resources/PractitionerRole-practitioner-role-example-1.json Show Validation Information (1)

PathSeverityMessage
PractitionerRole.code[0] (l12/c6)warningValueSet 'http://hl7.org/fhir/ValueSet/practitioner-role' not found
PractitionerRole.code[0] (l12/c6)informationReference to draft CodeSystem http://terminology.hl7.org/CodeSystem/practitioner-role|0.1.0

fsh-generated/resources/Questionnaire-example-questionnaire-demographics-1.json Show Validation Information (1)

PathSeverityMessage
Questionnaire.urlerrorResource id/url mismatch: example-questionnaire-demographics-1/https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.json Show Validation Information (1)

PathSeverityMessage
QuestionnaireResponse​.item[3]​.answer[0]​.value​.ofType(Coding) (l47​/c12)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
QuestionnaireResponse​.item[1]​.answer[0] (l24​/c34)informationCannot validate string answer option because no option list is provided
QuestionnaireResponse​.item[3]​.answer[0] (l47​/c12)warningThe code provided C99269 cannot be validated in the options value set (Case/Control Vars for 'status' categoricals) in the questionnaire because the system https://uts.nlm.nih.gov/uts/umls could not be found

fsh-generated/resources/ResearchStudy-cmg-research-study-bhcmg.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy​.extension[0]​.value​.ofType(CodeableConcept)​.coding[0]​.system (l23​/c8)informationA definition for CodeSystem 'https://dbgap-api.ncbi.nlm.nih.gov/fhir/x1/CodeSystem/ResearchStudy-StudyDesign' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
ResearchStudy​.extension[0]​.value​.ofType(CodeableConcept)​.coding[1]​.system (l23​/c8)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
ResearchStudy​.category[0]​.coding[0]​.system (l10​/c6)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
ResearchStudy​.focus[0]​.coding[0]​.system (l56​/c6)informationA definition for CodeSystem 'http://purl.obolibrary.org/obo/mondo.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
ResearchStudy.focus[1] (l65/c6)informationReference to draft CodeSystem http://purl.obolibrary.org/obo/hp.owl|0.2.0 (from http://tx.fhir.org/r4)
ResearchStudy​.focus[1]​.coding[1] (l65​/c6)informationA definition for CodeSystem 'urn:oid:2.16.840.1.113883.6.177' could not be found, so the code cannot be validated
ResearchStudy​.focus[2]​.coding[0]​.system (l79​/c6)informationA definition for CodeSystem 'http://purl.obolibrary.org/obo/mondo.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
ResearchStudy​.focus[2]​.coding[1] (l79​/c6)informationA definition for CodeSystem 'urn:oid:2.16.840.1.113883.6.177' could not be found, so the code cannot be validated

fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-irb-npu.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy.enrollment[0] (l31/c6)errorUnable to resolve resource with reference 'cmg-research-study-bhcmg-group-hmb-irb-npu'
ResearchStudy.text.diverrorNew Rule: Hyperlink 'cmg-research-study-bhcmg-group-hmb-irb-npu' at 'div/p/a' for 'cmg-research-study-bhcmg-group-hmb-irb-npu' does not resolve

fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-npu.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-ncpi-research-study-01.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy​.primaryPurposeType​.coding[0] (l28​/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
ResearchStudy​.category[0]​.coding[0]​.system (l10​/c6)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)

fsh-generated/resources/ResearchStudy-ncpi-research-study-subject-01.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-research-study-cmg.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy​.primaryPurposeType​.coding[0] (l6​/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
ResearchStudy​.category[0]​.coding[0]​.system (l14​/c6)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)

fsh-generated/resources/ResearchStudy-research-study-example-1.json Show Validation Information (1)


fsh-generated/resources/ResearchStudy-research-study-phs000711.json Show Validation Information (1)

PathSeverityMessage
ResearchStudy​.primaryPurposeType​.coding[0] (l6​/c4)warningCoding has no system. A code with no system has no defined meaning, and it cannot be validated. A system should be provided
ResearchStudy​.category[0]​.coding[0]​.system (l19​/c6)informationA definition for CodeSystem 'https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)

fsh-generated/resources/ResearchSubject-research-subject-example-1.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-example-2.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-example-3.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-01.json Show Validation Information (1)


fsh-generated/resources/ResearchSubject-research-subject-study-01-patient-02.json Show Validation Information (1)


fsh-generated/resources/Specimen-ncpi-research-study-01-specimen-01.json Show Validation Information (1)

PathSeverityMessage
Specimen.type.coding[0].system (l5/c4)informationA definition for CodeSystem 'http://purl.obolibrary.org/obo/ncit.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)

fsh-generated/resources/Specimen-specimen-example-1.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-common-data-model-research-study.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[0] (l1​/c27650)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[1] (l1​/c27986)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[2] (l1​/c28340)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[3] (l1​/c28632)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[4] (l1​/c28987)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[5] (l1​/c29319)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[6] (l1​/c29699)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[7] (l1​/c29982)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[8] (l1​/c30252)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[9] (l1​/c30540)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[10] (l1​/c30818)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[11] (l1​/c31145)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.snapshot​.element[12] (l1​/c31448)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[0] (l1​/c31830)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[1] (l1​/c32086)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[2] (l1​/c32361)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[3] (l1​/c32579)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[4] (l1​/c32854)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[5] (l1​/c33105)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[6] (l1​/c33402)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[7] (l1​/c33604)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[8] (l1​/c33796)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[9] (l1​/c34002)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[10] (l1​/c34200)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[11] (l1​/c34449)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)
StructureDefinition​.differential​.element[12] (l1​/c34667)warningConstraint failed: eld-20: 'Element names should be simple alphanumerics with a max of 64 characters, or code generation tools may be broken' (defined in http://hl7.org/fhir/StructureDefinition/ElementDefinition)

fsh-generated/resources/StructureDefinition-disease.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-family-relationship.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-drs-attachment.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-drs-document-reference.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-research-consortium.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-research-document-reference.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-ncpi-research-study.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[23]​.short (l1​/c66690)warningvalue should not start or finish with whitespace 'Disease or phenotypes that were interrogated during the study’s execution. MONDO, HPO '
StructureDefinition​.differential​.element[6]​.short (l1​/c96330)warningvalue should not start or finish with whitespace 'Disease or phenotypes that were interrogated during the study’s execution. MONDO, HPO '
StructureDefinition​.snapshot​.element[20]​.pattern​.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

fsh-generated/resources/StructureDefinition-ncpi-specimen-task.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-phenotype.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-raw-data-observation.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.where(url = 'https:​/​/nih-ncpi​.github​.io​/ncpi-fhir-ig​/StructureDefinition​/raw-data-observation')warningThe Implementation Guide contains no examples for this profile

fsh-generated/resources/StructureDefinition-research-consent-disease-abbreviation.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type for research-consent-disease-abbreviation: extensions should not have a context of Element unless it's really intended that they can be used anywhere
StructureDefinition​.snapshot​.element[0]​.constraint[2] (l1​/c13581)errorError in constraint 'disease-specific-consent-code' with expression 'valueString.matches('DS-[A-Z]+')': Error evaluating FHIRPath expression: The name 'valueString' is not valid for any of the possible types: [http://hl7.org/fhir/StructureDefinition/Extension] (@char 1)
StructureDefinition​.where(url = 'https:​/​/nih-ncpi​.github​.io​/ncpi-fhir-ig​/StructureDefinition​/research-consent-disease-abbreviation')warningThe Implementation Guide contains no examples for this extension

fsh-generated/resources/StructureDefinition-research-disease-use-limitation.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type for research-disease-use-limitation: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/StructureDefinition-research-study-design.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type for research-study-design: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/StructureDefinition-research-study-subject.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[24]​.short (l1​/c46793)warningvalue should not start or finish with whitespace 'Disease or phenotypes that were interrogated during the study’s execution. MONDO, HPO '
StructureDefinition​.snapshot​.element[21]​.pattern​.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

fsh-generated/resources/StructureDefinition-research-study-subject-consent.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type for research-study-subject-consent: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/StructureDefinition-study-data-dictionary-harmony.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-data-dictionary-table.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-data-dictionary-variable.json Show Validation Information (1)


fsh-generated/resources/StructureDefinition-study-group.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[13]​.pattern​.ofType(CodeableConcept)​.coding[0]​.system (l1​/c45656)informationA definition for CodeSystem 'http://purl.obolibrary.org/obo/ncit.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)
StructureDefinition​.differential​.element[2]​.pattern​.ofType(CodeableConcept)​.coding[0]​.system (l1​/c67076)informationA definition for CodeSystem 'http://purl.obolibrary.org/obo/ncit.owl' could not be found, so the code cannot be validated (from http://tx.fhir.org/r4)

fsh-generated/resources/StructureDefinition-study-summary.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[17]​.pattern​.ofType(Coding) (l1​/c50571)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
StructureDefinition​.differential​.element[1]​.pattern​.ofType(Coding) (l1​/c106288)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
StructureDefinition​.snapshot​.element[17]​.pattern​.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)
StructureDefinition​.where(url = 'https:​/​/nih-ncpi​.github​.io​/ncpi-fhir-ig​/StructureDefinition​/study-summary')warningThe Implementation Guide contains no examples for this profile

fsh-generated/resources/StructureDefinition-study-variable-summary.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[17]​.pattern​.ofType(Coding) (l1​/c54232)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
StructureDefinition​.differential​.element[1]​.pattern​.ofType(Coding) (l1​/c111466)informationA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
StructureDefinition​.snapshot​.element[17]​.pattern​.ofType(Coding)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

fsh-generated/resources/StructureDefinition-supporting-info.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition.context[0]warningReview the extension type for supporting-info: extensions should not have a context of Element unless it's really intended that they can be used anywhere

fsh-generated/resources/Task-task-example-1.json Show Validation Information (1)

PathSeverityMessage
Task.intent (l5/c20)informationReference to experimental CodeSystem http://hl7.org/fhir/request-intent|4.3.0

fsh-generated/resources/Task-task-example-2.json Show Validation Information (1)

PathSeverityMessage
Task.intent (l10/c20)informationReference to experimental CodeSystem http://hl7.org/fhir/request-intent|4.3.0

fsh-generated/resources/ValueSet-condition-inheritance-vs.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c1128)warningPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present

fsh-generated/resources/ValueSet-datatable-mappings-valueset-1.json Show Validation Information (1)

PathSeverityMessage
ValueSet.compose.include[0]warningUnknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: A definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated)
ValueSet (l1/c3405)warningPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
ValueSet​.where(id = 'datatable-mappings-valueset-1')warningError from http://tx.fhir.org/r4: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls (from , see log)

fsh-generated/resources/ValueSet-datatable-valueset-1.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c1040)warningPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present

fsh-generated/resources/ValueSet-disease-codes.json Show Validation Information (1)


fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1.json Show Validation Information (1)

PathSeverityMessage
ValueSet.compose.include[0]warningUnknown System 'https://uts.nlm.nih.gov/uts/umls' specified, so Concepts and Filters can't be checked (Details: A definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated)
ValueSet (l1/c1237)warningPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
ValueSet​.where(id = 'example-study-data-dictionary-case-control-vs-1')warningError from http://tx.fhir.org/r4: Unable to provide support for code system https://uts.nlm.nih.gov/uts/umls (from , see log)

fsh-generated/resources/ValueSet-loinc-answers.json Show Validation Information (1)


fsh-generated/resources/ValueSet-mesh-terms.json Show Validation Information (1)

PathSeverityMessage
ValueSet.where(id = 'mesh-terms')warningError from http://tx.fhir.org/r4: Unable to provide support for code system urn:oid:2.16.840.1.113883.6.177 (from , see log)

fsh-generated/resources/ValueSet-ncpi-vs.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c1173)warningPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present

fsh-generated/resources/ValueSet-nih-consent-codes.json Show Validation Information (1)

PathSeverityMessage
ValueSet (l1/c953)warningPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present

fsh-generated/resources/ValueSet-phenotype-codes.json Show Validation Information (1)

PathSeverityMessage
ValueSet.where(id = 'phenotype-codes')informationThe value set expansion is too large, and only a subset has been displayed

fsh-generated/resources/ValueSet-study-design.json Show Validation Information (1)

PathSeverityMessage
ValueSet.where(id = 'study-design')warningError from http://tx.fhir.org/r4: Unable to provide support for code system https://hl7.org/fhir/codesystem-study-design.html (from , see log)

fsh-generated/resources/ValueSet-tbd-codes.json Show Validation Information (1)

PathSeverityMessage
ValueSet​.where(url = 'http:​/​/hl7​.org​/fhir​/uv​/genomics-reporting​/ValueSet​/tbd-codes')errorConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes)
ValueSet (l1/c1098)warningThe nominated WG 'cg' means that the publisher should be 'HL7 International / Clinical Genomics' but 'NCPI FHIR Working Group' was found
ValueSet (l1/c1098)warningThe nominated WG 'cg' means that the contact url should be 'http://www.hl7.org/Special/committees/clingenomics' but it was not found
fsh-generated​/resources​/ValueSet-tbd-codeserrorURL Mismatch https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes vs http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes

input/resources/StructureDefinition-research-study-consent.json Show Validation Information (1)

PathSeverityMessage
StructureDefinition​.snapshot​.element[12]​.pattern​.ofType(CodeableConcept) (l1​/c47592)informationReference to draft CodeSystem http://terminology.hl7.org/CodeSystem/consentcategorycodes|0.1.0
StructureDefinition​.differential​.element[1]​.pattern​.ofType(CodeableConcept) (l1​/c100518)informationReference to draft CodeSystem http://terminology.hl7.org/CodeSystem/consentcategorycodes|0.1.0
StructureDefinition​.snapshot​.element[12]​.pattern​.ofType(CodeableConcept)informationThe repeating element has a pattern. The pattern will apply to all the repeats (this has not been clear to all users)

Suppressed Messages (Warnings, hints, broken links)

No suppressed messsages

Errors sorted by type


All_observations_should_have_a_performer

fsh-generated/resources/Observation-anvil-summary-cmg.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-diagnostic-implication-1.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-example-observation-data-row-1.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-example-study-summary-gender.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-family-relationship-example-1.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-family-relationship-example-2.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-family-relationship-example-3.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-family-relationship-example-4.jsonBest Practice Recommendation: In general, all observations should have a performer
fsh-generated/resources/Observation-variant-example-1.jsonBest Practice Recommendation: In general, all observations should have a performer

All_observations_should_have_a_subject

fsh-generated/resources/Observation-anvil-summary-cmg.jsonBest Practice Recommendation: In general, all observations should have a subject
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonBest Practice Recommendation: In general, all observations should have a subject
fsh-generated/resources/Observation-diagnostic-implication-1.jsonBest Practice Recommendation: In general, all observations should have a subject
fsh-generated/resources/Observation-variant-example-1.jsonBest Practice Recommendation: In general, all observations should have a subject

All_observations_should_have_an_effectiveDateTime_or_an_effectivePeriod

fsh-generated/resources/Observation-anvil-summary-cmg.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-anvil-summary-phs000711.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-diagnostic-implication-1.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-example-observation-data-row-1.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-example-study-summary-gender.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-family-relationship-example-1.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-family-relationship-example-2.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-family-relationship-example-3.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-family-relationship-example-4.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()
fsh-generated/resources/Observation-variant-example-1.jsonBest Practice Recommendation: In general, all observations should have an effective[x] ()

CODESYSTEM_CS_COUNT_COMPLETE_WRONG

fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.jsonThe code system is complete, but the number of concepts (6) does not match the stated total number (5)

CODESYSTEM_SHAREABLE_MISSING

fsh-generated/resources/CodeSystem-ConditionInheritanceMode.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
fsh-generated/resources/CodeSystem-ConditionInheritanceMode.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
fsh-generated/resources/CodeSystem-example-study-data-dictionary-dataset-codesystem-1.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
fsh-generated/resources/CodeSystem-example-study-data-dictionary-datatable-codesystem-1.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-hpo.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-ncpi.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-ncpi-data-types.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-ncpi-study-type.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-nih-consent.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.experimental is mandatory, but it is not present
fsh-generated/resources/CodeSystem-nih-consent.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present
fsh-generated/resources/CodeSystem-v3-hgvs.jsonPublished code systems SHOULD conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

CODESYSTEM_SHAREABLE_MISSING_HL7

fsh-generated/resources/CodeSystem-tbd-codes.jsonPublished code systems SHALL conform to the ShareableCodeSystem profile, which says that the element CodeSystem.caseSensitive is mandatory, but it is not present

CONCEPTMAP_GROUP_TARGET_INCOMPLETE

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonTarget Code System http://loinc.org doesn't have all content (content = not-present), so the target codes cannot be checked
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonTarget Code System http://purl.obolibrary.org/obo/hp.owl doesn't have all content (content = fragment), so the target codes cannot be checked
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonTarget Code System http://purl.obolibrary.org/obo/mondo.owl doesn't have all content (content = fragment), so the target codes cannot be checked

CONCEPTMAP_SHAREABLE_EXTRA_MISSING

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.name should be present, but it is not

CONCEPTMAP_SHAREABLE_MISSING

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.title is mandatory, but it is not present
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.experimental is mandatory, but it is not present
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonPublished concept maps SHOULD conform to the ShareableConceptMap profile, which says that the element ConceptMap.description is mandatory, but it is not present

ED_INVARIANT_EXPRESSION_ERROR

fsh-generated/resources/StructureDefinition-research-consent-disease-abbreviation.jsonError in constraint 'disease-specific-consent-code' with expression 'valueString.matches('DS-[A-Z]+')': Error evaluating FHIRPath expression: The name 'valueString' is not valid for any of the possible types: [http://hl7.org/fhir/StructureDefinition/Extension] (@char 1)

EXTENSION_EXTM_CONTEXT_WRONG_XVER

fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)
fsh-generated/resources/ConceptMap-example-study-data-dictionary-conceptmap-1.jsonThe modifier extension http://hl7.org/fhir/1.0/StructureDefinition/extension-ConceptMap.element.target.equivalence from FHIR version 1.0 is not allowed to be used at this point (allowed = e:ConceptMap.element.target; this element is [[BackboneElement, ConceptMap.group.element.target]; this is a warning since contexts may be renamed between FHIR versions)

QUESTIONNAIRE_QR_ITEM_BADOPTION_CS

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.jsonThe code provided C99269 cannot be validated in the options value set (Case/Control Vars for 'status' categoricals) in the questionnaire because the system https://uts.nlm.nih.gov/uts/umls could not be found

Questionnaire_QR_Item_StringNoOptions

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.jsonCannot validate string answer option because no option list is provided

RESOURCE_CANONICAL_MISMATCH

fsh-generated/resources/CodeSystem-dbgap-study-design.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-dbgap-study-design.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/dbgap-study-design) does not match the URL (https://dbgap-api.ncbi.nlm.nih.gov/fhir/x1/CodeSystem/ResearchStudy-StudyDesign)
fsh-generated/resources/CodeSystem-hpo.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-hpo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/hpo) does not match the URL (http://purl.obolibrary.org/obo/hp.owl)
fsh-generated/resources/CodeSystem-mondo.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-mondo.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/mondo) does not match the URL (http://purl.obolibrary.org/obo/mondo.owl)
fsh-generated/resources/CodeSystem-ncit.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncit.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncit) does not match the URL (http://purl.obolibrary.org/obo/ncit.owl)
fsh-generated/resources/CodeSystem-ncpi-study-type.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-ncpi-study-type.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-type) does not match the URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types)
fsh-generated/resources/CodeSystem-omim.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-omim.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/omim) does not match the URL (https://omim.org/)
fsh-generated/resources/CodeSystem-tbd-codes.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/CodeSystem/tbd-codes)
fsh-generated/resources/CodeSystem-v3-hgvs.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/CodeSystem-v3-hgvs.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/v3-hgvs) does not match the URL (http://varnomen.hgvs.org)
fsh-generated/resources/ValueSet-tbd-codes.jsonConformance resource /home/runner/work/ncpi-fhir-ig/ncpi-fhir-ig/fsh-generated/resources/ValueSet-tbd-codes.json - the canonical URL (https://nih-ncpi.github.io/ncpi-fhir-ig/ValueSet/tbd-codes) does not match the URL (http://hl7.org/fhir/uv/genomics-reporting/ValueSet/tbd-codes)

RESOURCE_ID_MISMATCH

fsh-generated/resources/CodeSystem-ncpi-study-type.jsonResource id/url mismatch: ncpi-study-type/https://nih-ncpi.github.io/ncpi-fhir-ig/CodeSystem/ncpi-study-types
fsh-generated/resources/Questionnaire-example-questionnaire-demographics-1.jsonResource id/url mismatch: example-questionnaire-demographics-1/https://nih-ncpi.github.io/ncpi-fhir-ig/data-dictionary/study-name/demographics

Reference_REF_CantResolve

fsh-generated/resources/ResearchStudy-cmg-research-study-subject-cmg-hmb-irb-npu.jsonUnable to resolve resource with reference 'cmg-research-study-bhcmg-group-hmb-irb-npu'

Terminology_TX_System_NotKnown

fsh-generated/resources/QuestionnaireResponse-example-questionnaire-demographics-response-1.jsonA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-summary.jsonA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-summary.jsonA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-variable-summary.jsonA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated
fsh-generated/resources/StructureDefinition-study-variable-summary.jsonA definition for CodeSystem 'https://uts.nlm.nih.gov/uts/umls' could not be found, so the code cannot be validated

Terminology_TX_ValueSet_NotFound

fsh-generated/resources/PractitionerRole-practitioner-role-example-1.jsonValueSet 'http://hl7.org/fhir/ValueSet/practitioner-role' not found

Type_Specific_Checks_DT_String_WS

fsh-generated/resources/StructureDefinition-ncpi-research-study.jsonvalue should not start or finish with whitespace 'Disease or phenotypes that were interrogated during the study’s execution. MONDO, HPO '
fsh-generated/resources/StructureDefinition-ncpi-research-study.jsonvalue should not start or finish with whitespace 'Disease or phenotypes that were interrogated during the study’s execution. MONDO, HPO '
fsh-generated/resources/StructureDefinition-research-study-subject.jsonvalue should not start or finish with whitespace 'Disease or phenotypes that were interrogated during the study’s execution. MONDO, HPO '

VALIDATION_HL7_PUBLISHER_MISMATCH

fsh-generated/resources/ValueSet-tbd-codes.jsonThe nominated WG 'cg' means that the publisher should be 'HL7 International / Clinical Genomics' but 'NCPI FHIR Working Group' was found

VALIDATION_HL7_WG_NEEDED

fsh-generated/resources/CodeSystem-tbd-codes.jsonWhen HL7 is publishing a resource, the owning committee must be stated using the http://hl7.org/fhir/StructureDefinition/structuredefinition-wg extension

VALIDATION_HL7_WG_URL

fsh-generated/resources/ValueSet-tbd-codes.jsonThe nominated WG 'cg' means that the contact url should be 'http://www.hl7.org/Special/committees/clingenomics' but it was not found

VALUESET_SHAREABLE_MISSING

fsh-generated/resources/ValueSet-condition-inheritance-vs.jsonPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
fsh-generated/resources/ValueSet-datatable-mappings-valueset-1.jsonPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
fsh-generated/resources/ValueSet-datatable-valueset-1.jsonPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
fsh-generated/resources/ValueSet-example-study-data-dictionary-case-control-vs-1.jsonPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
fsh-generated/resources/ValueSet-ncpi-vs.jsonPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present
fsh-generated/resources/ValueSet-nih-consent-codes.jsonPublished value sets SHOULD conform to the ShareableValueSet profile, which says that the element ValueSet.experimental is mandatory, but it is not present